Zm00001e031685_P005 (ATGDI1, AT-GDI1,...)

Aliases : ATGDI1, AT-GDI1, GDI1, Zm00001e031685

Description : RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)

Gene families : OG0002116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002116_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e031685_P005

Target	Alias	Description	ECC score	Gene Family Method
Adi_g020742	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Adi_g034833	No alias	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Aev_g03163	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Ala_g19450	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Aop_g01791	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.05	OrthoFinder output from all 47 species
Cba_g12737	No alias	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Cba_g77977	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Ceric.12G005600.1	ATGDI1, AT-GDI1,...	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Cre09.g388467	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
Dac_g07245	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.04	OrthoFinder output from all 47 species
Dcu_g06290	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.05	OrthoFinder output from all 47 species
Dde_g22331	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
LOC_Os05g34540.1	ATGDI1, AT-GDI1,...	RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)	0.05	OrthoFinder output from all 47 species
Len_g09591	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Lfl_g06971	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Mp6g05010.1	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)	0.02	OrthoFinder output from all 47 species
Msp_g10692	No alias	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.05	OrthoFinder output from all 47 species
Nbi_g21880	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Pir_g02243	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Pnu_g06586	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Smo271917	ATGDI1, AT-GDI1, GDI1	Vesicle trafficking.regulation of membrane tethering and...	0.04	OrthoFinder output from all 47 species
Solyc08g015860.3.1	GDI2, ATGDI2,...	RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)	0.05	OrthoFinder output from all 47 species
Spa_g29928	No alias	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Tin_g12403	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Zm00001e002072_P001	Zm00001e002072	RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
MF	GO:0005319	lipid transporter activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0120009	intermembrane lipid transfer	IEP	HCCA
MF	GO:0120013	lipid transfer activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018203	GDP_dissociation_inhibitor	1	433

External Links

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Zm00001e031685_P005 (ATGDI1, AT-GDI1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation