Aliases : ALY4, Zm00001e030972
Description : mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP trafficking complex
Gene families : OG0000667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000667_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e030972_P001 | |
Cluster | HCCA: Cluster_13 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G59950 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
Cre10.g462250 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os08g33120.1 | ALY4, LOC_Os08g33120 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g05319 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g00624 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 111 | 179 |
No external refs found! |