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  5. Zm00001e030542_P001

Zm00001e030542_P001 (Zm00001e030542)


Aliases : Zm00001e030542

Description : Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 657.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 285.9)


Gene families : OG0003404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030542_P001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT3G07830 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G07840 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01028044001 PGA4 Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030023001 No alias Polygalacturonase OS=Gossypium hirsutum 0.02 OrthoFinder output from all 47 species
GSVIVT01035102001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035103001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia 0.04 OrthoFinder output from all 47 species
LOC_Os01g33300.1 LOC_Os01g33300 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.04 OrthoFinder output from all 47 species
LOC_Os02g10300.1 LOC_Os02g10300 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.05 OrthoFinder output from all 47 species
LOC_Os06g35320.1 LOC_Os06g35320 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.11 OrthoFinder output from all 47 species
LOC_Os06g40880.1 LOC_Os06g40880 Probable galacturan 1,4-alpha-galacturonidase SALK6... 0.02 OrthoFinder output from all 47 species
Solyc01g066070.3.1 Solyc01g066070 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.03 OrthoFinder output from all 47 species
Solyc06g009200.3.1 PGA4, Solyc06g009200 Polygalacturonase OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Solyc07g044870.4.1 Solyc07g044870 Polygalacturonase OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
Zm00001e014066_P002 Zm00001e014066 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 OrthoFinder output from all 47 species
Zm00001e014069_P001 Zm00001e014069 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 OrthoFinder output from all 47 species
Zm00001e014072_P001 Zm00001e014072 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 OrthoFinder output from all 47 species
Zm00001e017747_P001 Zm00001e017747 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 OrthoFinder output from all 47 species
Zm00001e026354_P001 Zm00001e026354 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 OrthoFinder output from all 47 species
Zm00001e030524_P001 Zm00001e030524 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.05 OrthoFinder output from all 47 species
Zm00001e030530_P001 Zm00001e030530 Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.03 OrthoFinder output from all 47 species
Zm00001e030533_P001 Zm00001e030533 Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 OrthoFinder output from all 47 species
Zm00001e042494_P001 Zm00001e042494 Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 68 386
No external refs found!