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  5. Zm00001e030533_P001

Zm00001e030533_P001 (Zm00001e030533)


Aliases : Zm00001e030533

Description : Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize : 778.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 319.5)


Gene families : OG0003404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030533_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G07820 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G07830 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G07840 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G07850 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G14040 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G48140 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01028044001 PGA4 Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01030017001 No alias Polygalacturonase OS=Gossypium hirsutum 0.03 OrthoFinder output from all 47 species
GSVIVT01030023001 No alias Polygalacturonase OS=Gossypium hirsutum 0.03 OrthoFinder output from all 47 species
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.03 OrthoFinder output from all 47 species
GSVIVT01035103001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia 0.04 OrthoFinder output from all 47 species
LOC_Os01g33300.1 LOC_Os01g33300 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.08 OrthoFinder output from all 47 species
LOC_Os02g10300.1 LOC_Os02g10300 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.07 OrthoFinder output from all 47 species
LOC_Os06g35320.1 LOC_Os06g35320 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.07 OrthoFinder output from all 47 species
LOC_Os06g40890.1 LOC_Os06g40890 Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.03 OrthoFinder output from all 47 species
Solyc01g066070.3.1 Solyc01g066070 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 OrthoFinder output from all 47 species
Solyc06g009200.3.1 PGA4, Solyc06g009200 Polygalacturonase OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Solyc07g044870.4.1 Solyc07g044870 Polygalacturonase OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Zm00001e022246_P002 Zm00001e022246 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.04 OrthoFinder output from all 47 species
Zm00001e025021_P003 Zm00001e025021 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 OrthoFinder output from all 47 species
Zm00001e030532_P001 Zm00001e030532 Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 345.0) 0.05 OrthoFinder output from all 47 species
Zm00001e030542_P001 Zm00001e030542 Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 68 399
No external refs found!