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  5. Zm00001e030526_P001

Zm00001e030526_P001 (Zm00001e030526)


Aliases : Zm00001e030526

Description : Exopolygalacturonase (Fragment) OS=Platanus acerifolia (sp|q6h9k0|pglr2_Plaac : 315.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 253.3)


Gene families : OG0003404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030526_P001
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00058670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
LOC_Os06g40880.1 LOC_Os06g40880 Probable galacturan 1,4-alpha-galacturonidase SALK6... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 57 152
IPR000743 Glyco_hydro_28 172 411
No external refs found!