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  5. Zm00001e029498_P003

Zm00001e029498_P003 (SIZ1, ATSIZ1, Zm00001e029498)


Aliases : SIZ1, ATSIZ1, Zm00001e029498

Description : SUMO E3 ligase (SIZ1)


Gene families : OG0002076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029498_P003
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00092680 SIZ1, ATSIZ1,... Protein degradation.peptide... 0.05 OrthoFinder output from all 47 species
Adi_g019402 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16402 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z183600.1 SIZ1, ATSIZ1,... E3 SUMO ubiquitin ligase *(SIZ1) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01025151001 SIZ1, ATSIZ1 Protein degradation.peptide... 0.04 OrthoFinder output from all 47 species
Solyc06g010000.3.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.02 OrthoFinder output from all 47 species
Solyc11g069160.3.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR003034 SAP_dom 15 43
IPR004181 Znf_MIZ 362 409
No external refs found!