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  5. Zm00001e029180_P005

Zm00001e029180_P005 (EMB140, Zm00001e029180)


Aliases : EMB140, Zm00001e029180

Description : no hits & (original description: none)


Gene families : OG0005015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029180_P005

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00147110 EMB140,... No description available 0.03 OrthoFinder output from all 47 species
AT4G24270 EMB140 EMBRYO DEFECTIVE 140 0.06 OrthoFinder output from all 47 species
Adi_g061140 EMB140 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02511 EMB140 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02313 EMB140 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08974 EMB140 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000961 EMB140 not classified & original description: CDS=38-2449 0.03 OrthoFinder output from all 47 species
Ceric.36G050300.1 EMB140, Ceric.36G050300 not classified & original description: pacid=50568320... 0.05 OrthoFinder output from all 47 species
Cre12.g546700 EMB140 No description available 0.03 OrthoFinder output from all 47 species
Dcu_g14459 EMB140 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15244 EMB140 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023136001 EMB140 No description available 0.02 OrthoFinder output from all 47 species
LOC_Os08g02130.2 EMB140, LOC_Os08g02130 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g23197 EMB140 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433949g0010 EMB140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g42149 EMB140 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g44100 EMB140 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo402481 EMB140 No description available 0.06 OrthoFinder output from all 47 species
Solyc01g102970.3.1 EMB140, Solyc01g102970 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g48029 EMB140 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
CC GO:0000176 nuclear exosome (RNase complex) IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 673 741
IPR008847 Suf 454 631
No external refs found!