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  5. Zm00001e029056_P003

Zm00001e029056_P003 (HAT3.1, Zm00001e029056)


Aliases : HAT3.1, Zm00001e029056

Description : transcription factor (PHD)


Gene families : OG0002217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029056_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272780 HAT3.1,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Adi_g089260 PRHA PHD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115505 PRHA PHD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0110.g045488 PRHA PHD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g492200 HAT3.1 RNA biosynthesis.transcriptional activation.HB... 0.01 OrthoFinder output from all 47 species
Dcu_g44685 PRHA PHD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037894001 HAT3.1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12400.1 HAT3.1, LOC_Os06g12400 transcription factor (PHD) 0.05 OrthoFinder output from all 47 species
Len_g01344 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27981 PRHA PHD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp4g02060.1 PRHA transcription factor (PHD) 0.06 OrthoFinder output from all 47 species
Ore_g29974 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10872 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g008730.2.1 PRHA, Solyc07g008730 transcription factor (PHD) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 475 529
IPR001356 Homeobox_dom 1059 1101
IPR001356 Homeobox_dom 808 853
No external refs found!