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Aliases : ATPPC3, PPC3, Zm00001e029018
Description : PEP carboxylase
Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e029018_P001 | |
| Cluster | HCCA: Cluster_97 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g30833 | PEPC1, ATPEPC1,... | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g14127 | PEPC1, ATPEPC1,... | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g32641 | PEPC1, ATPEPC1,... | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23356 | PPC2, ATPPC2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020705001 | ATPPC3, PPC3 | Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10435515g0010 | PEPC1, ATPEPC1,... | Phosphoenolpyruvate carboxylase OS=Picea abies... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g16440.1 | ATPPC4, PPC4 | PEP carboxylase | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10442 | PEPC1, ATPEPC1,... | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c3_11630V3.1 | Pp3c3_11630 | phosphoenolpyruvate carboxylase 1 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15596 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006099 | tricarboxylic acid cycle | IEA | Interproscan |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEA | Interproscan |
| BP | GO:0015977 | carbon fixation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021135 | PEP_COase | 163 | 966 |
| No external refs found! |