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  5. Zm00001e028728_P001

Zm00001e028728_P001 (Zm00001e028728)


Aliases : Zm00001e028728

Description : no hits & (original description: none)


Gene families : OG0004768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028728_P001
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024787001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g63470.1 LOC_Os01g63470 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc03g025340.1.1 Solyc03g025340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 46 144
No external refs found!