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  5. Zm00001e028466_P001

Zm00001e028466_P001 (SPS3F, ATSPS3F, Zm00001e028466)


Aliases : SPS3F, ATSPS3F, Zm00001e028466

Description : sucrose-phosphate synthase


Gene families : OG0000773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028466_P001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00104230 ATSPS4F,... Carbohydrate metabolism.sucrose... 0.06 OrthoFinder output from all 47 species
AT4G10120 ATSPS4F Sucrose-phosphate synthase family protein 0.06 OrthoFinder output from all 47 species
Aev_g18207 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024749 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: CDS=205-3327 0.06 OrthoFinder output from all 47 species
Ceric.04G026900.1 SPS2F, KNS2,... EC_2.4 glycosyltransferase & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g22278 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012825001 SPS1F, ATSPS1F Carbohydrate metabolism.sucrose... 0.04 OrthoFinder output from all 47 species
GSVIVT01020928001 SPS3F, ATSPS3F Carbohydrate metabolism.sucrose... 0.01 OrthoFinder output from all 47 species
LOC_Os01g69030.4 SPS3F, ATSPS3F,... sucrose-phosphate synthase 0.01 OrthoFinder output from all 47 species
LOC_Os11g12810.1 ATSPS4F, LOC_Os11g12810 sucrose-phosphate synthase 0.03 OrthoFinder output from all 47 species
Lfl_g03460 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26385 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09794 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05645 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g31434 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEA Interproscan
MF GO:0016157 sucrose synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000368 Sucrose_synth 178 407
IPR001296 Glyco_trans_1 484 657
IPR006380 SPP-like_dom 818 1017
No external refs found!