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Aliases : AT-TCP20, TCP20, PCF1, ATTCP20, Zm00001e028426
Description : transcription factor (TCP). TCP20 circadian clock activation factor
Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G51910 | No alias | TCP family transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007407 | AT-TCP20, TCP20,... | circAdian clock activation factor *(TCP20) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055980 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g088075 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g01440 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12872 | No alias | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030896 | No alias | TCP-type transcription factor & original description: CDS=1-1743 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G015000.1 | Ceric.25G015000 | TCP-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g19331 | No alias | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g69980.1 | AT-TCP20, TCP20,... | transcription factor (TCP). TCP20 circadian clock... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g43160.1 | LOC_Os08g43160 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g07460.1 | LOC_Os11g07460 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05851 | No alias | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03168 | No alias | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07074 | No alias | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g00471 | AT-TCP20, TCP20,... | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g50317 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g008030.1.1 | Solyc09g008030 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g020670.1.1 | Solyc11g020670 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003744_P001 | Zm00001e003744 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000813 | ESCRT I complex | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0016197 | endosomal transport | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | HCCA |
| CC | GO:0036452 | ESCRT complex | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0051259 | protein complex oligomerization | IEP | HCCA |
| BP | GO:0051260 | protein homooligomerization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 91 | 160 |
| No external refs found! |