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  5. Zm00001e027977_P001

Zm00001e027977_P001 (RAN3, ATRAN3, Zm00001e027977)


Aliases : RAN3, ATRAN3, Zm00001e027977

Description : Ran GTPase


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027977_P001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Adi_g054055 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38517 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0147.g053043 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.03 OrthoFinder output from all 47 species
Azfi_s0548.g076431 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.03 OrthoFinder output from all 47 species
Cba_g15319 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15320 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27562 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15867 RAN2 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species
MA_28412g0010 RAN2 Ran GTPase 0.03 OrthoFinder output from all 47 species
Msp_g02691 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36246 RAN2 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species
Smo270966 RAN2 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Spa_g05239 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 171
No external refs found!