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  5. Zm00001e027880_P001

Zm00001e027880_P001 (Zm00001e027880)


Aliases : Zm00001e027880

Description : PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana (sp|p82715|ppd5_arath : 307.0)


Gene families : OG0010137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027880_P001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT5G11450 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.8 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01035726001 No alias PsbP domain-containing protein 5, chloroplastic... 0.04 OrthoFinder output from all 47 species
Gb_00451 No alias PsbP domain-containing protein 5, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os01g43070.1 LOC_Os01g43070 PsbP domain-containing protein 5, chloroplastic... 0.08 OrthoFinder output from all 47 species
Mp1g00680.1 No alias PsbP domain-containing protein 5, chloroplastic... 0.07 OrthoFinder output from all 47 species
Ore_g10404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g067840.3.1 Solyc08g067840 PsbP domain-containing protein 5, chloroplastic... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 102 284
No external refs found!