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  5. Zm00001e027747_P001

Zm00001e027747_P001 (ATVPS33, VPS33, Zm00001e027747)


Aliases : ATVPS33, VPS33, Zm00001e027747

Description : component VPS33 of HOPS/CORVET membrane tethering complexes


Gene families : OG0004462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027747_P001
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT3G54860 ATVPS33, VPS33 Sec1/munc18-like (SM) proteins superfamily 0.04 OrthoFinder output from all 47 species
Aev_g48751 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
Als_g06316 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.08 OrthoFinder output from all 47 species
Azfi_s0030.g024367 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 47 species
Ceric.21G067400.1 ATVPS33, VPS33,... component *(VPS33) of HOPS/CORVET membrane tethering... 0.16 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.65 ATVPS33, VPS33 Vesicle trafficking.target membrane... 0.01 OrthoFinder output from all 47 species
Dcu_g14537 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 47 species
Ehy_g01485 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.05 OrthoFinder output from all 47 species
GSVIVT01016224001 ATVPS33, VPS33 Vesicle trafficking.target membrane... 0.11 OrthoFinder output from all 47 species
Gb_31715 ATVPS33, VPS33 component VPS33 of HOPS/CORVET membrane tethering complexes 0.04 OrthoFinder output from all 47 species
LOC_Os04g14654.2 ATVPS33, VPS33,... component VPS33 of HOPS/CORVET membrane tethering complexes 0.05 OrthoFinder output from all 47 species
Len_g02362 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.1 OrthoFinder output from all 47 species
Mp4g15500.1 ATVPS33, VPS33 component VPS33 of HOPS/CORVET membrane tethering complexes 0.05 OrthoFinder output from all 47 species
Msp_g22122 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
Nbi_g05330 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
Pir_g20298 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
Solyc05g055600.4.1 ATVPS33, VPS33,... component VPS33 of HOPS/CORVET membrane tethering complexes 0.09 OrthoFinder output from all 47 species
Tin_g09527 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 36 589
No external refs found!