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  5. Zm00001e027676_P001

Zm00001e027676_P001 (TPR10, Zm00001e027676)


Aliases : TPR10, Zm00001e027676

Description : Probable E3 ubiquitin-protein ligase XBOS33 OS=Oryza sativa subsp. japonica (sp|q337a0|xb33_orysj : 89.7)


Gene families : OG0002865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027676_P001
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Aop_g33583 TPR10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16391 TPR10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 126 216
IPR020683 DUF3447 19 117
No external refs found!