Aliases : Zm00001e027279
Description : RING-HC-class E3 ligase
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e027279_P001 | |
Cluster | HCCA: Cluster_137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00048p00164020 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT3G58030 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g021121 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g021123 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g110750 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g07861 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09681 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene43421.t1 | Aspi01Gene43421 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0011.g012446 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0043.g027095 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0103.g044692 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0256.g060525 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.34G001100.1 | Ceric.34G001100 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g30245 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g05375 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g09951 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_12398 | No alias | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g61420.1 | LOC_Os01g61420 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Len_g09801 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04855 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp8g08340.1 | No alias | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Ore_g38674 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g45037 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e002512_P002 | Zm00001e002512 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
MF | GO:0043531 | ADP binding | IEP | HCCA |
CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |