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  5. Zm00001e027258_P002

Zm00001e027258_P002 (Zm00001e027258)


Aliases : Zm00001e027258

Description : no hits & (original description: none)


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027258_P002
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00210830 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.09 OrthoFinder output from all 47 species
AT5G40340 No alias Tudor/PWWP/MBT superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g060541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g113339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49342.t1 Aspi01Gene49342 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.08 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01025624001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_18977 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g38800.2 LOC_Os05g38800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
LOC_Os11g19810.1 LOC_Os11g19810 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g20479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10171844g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g20276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g24316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40244 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 241 328
No external refs found!