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Aliases : PI, Zm00001e027034
Description : transcription factor (MADS/AGL)
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e027034_P001 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00114420 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00228660 | AGL15,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00071p00198970 | XAL1, AGL12,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00089p00081270 | PI,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00015260 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G24260 | AGL9, SEP3 | K-box region and MADS-box transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G69120 | AGL7, AP1 | K-box region and MADS-box transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G03710 | AGL3, SEP4 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G42830 | SHP2, AGL5 | K-box region and MADS-box transcription factor family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G45650 | AGL6 | AGAMOUS-like 6 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G30260 | AGL79 | AGAMOUS-like 79 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G58780 | AGL1, SHP1 | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G09960 | STK, AGL11 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G11880 | AGL14 | AGAMOUS-like 14 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G24540 | AGL24 | AGAMOUS-like 24 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G20240 | PI | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G46320 | No alias | MADS-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G60910 | AGL8, FUL | AGAMOUS-like 8 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g001519 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033073 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20345 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46452 | AGL104 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07250 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38807 | AGL91 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07001 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g13176 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21518 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene13944.t1 | AGL18, Aspi01Gene13944 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene15814.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17769.t1 | AGL6, Aspi01Gene17769 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17774.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17819.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17826.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44619.t1 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44620.t2 | AGL6, Aspi01Gene44620 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g024032 | ANR1, AGL44 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13784 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G021900.1 | AGL16, Ceric.29G021900 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08553 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g38503 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g47939 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g27385 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01001437001 | AGL15 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006592001 | AGL61, DIA | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008139001 | AGL2, SEP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008806001 | PI | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009171001 | SVP, AGL22 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012249001 | AGL2, SEP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01012250001 | AGL7, AP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01014093001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018450001 | AGL6 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021303001 | SHP2, AGL5 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01022182001 | AGL104 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027577001 | AGL6 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033253001 | AGL15 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036551001 | AGL2, SEP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28587 | AGL8, FUL | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30604 | AGL6 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38920 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38922 | AGL6 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g10504.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g11510.1 | LOC_Os01g11510 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g66290.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g07430.1 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g36924.1 | AGL16, LOC_Os02g36924 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g11614.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g49150.1 | AGL6, LOC_Os04g49150 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g52410.2 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g11414.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g11330.1 | SVP, AGL22,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g11970.1 | AGL66, LOC_Os06g11970 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g23950.1 | LOC_Os06g23950 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g23980.1 | AGL16, LOC_Os06g23980 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g04170.1 | AP3, ATAP3,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g32948.1 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g10540.3 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g22235 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28933 | GL19, AGL19 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g56197 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g13029 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g36451 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g38767 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_13933g0010 | AGL13 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_18048g0010 | AGL21 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_19387g0010 | AGL9, SEP3 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_276701g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_2986g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_333471g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_34737g0010 | AGL17 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_8636733g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_8748850g0010 | AGL24 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38153 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11366 | AGL3, SEP4 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44138 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10184 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g46921 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g51490 | AGL24 | regulatory protein *(SVP/AGL24) of floral meristem... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g54533 | MAF2, AGL31 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g25142 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25344 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g60352 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g62573 | AGL24 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002217 | AGL15 | MADS/AGL-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13249 | No alias | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27719 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo85851 | AGL10, CAL1, CAL | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g106710.1.1 | AGL62, Solyc01g106710 | component MED19 of head module of MEDIATOR transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g065730.2.1 | AGL8, FUL, Solyc02g065730 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g091550.2.1 | AGL21, Solyc02g091550 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g005320.3.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g059970.4.1 | PI, Solyc06g059970 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g064840.4.1 | STK, AGL11,... | no description available(sp|f6i457|ag11c_vitvi : 172.0) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g055920.4.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g044965.1.1 | AGL21, Solyc10g044965 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g080030.2.1 | AGL18, Solyc10g080030 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g038510.2.1 | AGL4, SEP2,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g056460.3.1 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g01718 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07554 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12045 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29118 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g31312 | AGL2, SEP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47543 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g47544 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11248 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12905 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23921 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |