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  5. Zm00001e025985_P001

Zm00001e025985_P001 (Zm00001e025985)


Aliases : Zm00001e025985

Description : transcription factor (bHLH)


Gene families : OG0011158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011158_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025985_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00208400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT5G56960 No alias basic helix-loop-helix (bHLH) DNA-binding family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01015189001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_15442 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09990.1 LOC_Os01g09990 transcription factor (bHLH) 0.13 OrthoFinder output from all 47 species
LOC_Os05g11070.1 LOC_Os05g11070 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc07g039570.3.1 Solyc07g039570 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 271 313
No external refs found!