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  5. Zm00001e025913_P001

Zm00001e025913_P001 (SYP32, ATSYP32, Zm00001e025913)


Aliases : SYP32, ATSYP32, Zm00001e025913

Description : SYP3-group Qa-type SNARE component


Gene families : OG0002044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025913_P001
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Adi_g082701 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g03019 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Als_g04851 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0402.g068317 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Cba_g21473 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ceric.14G077600.1 SYP32, ATSYP32,... Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000073.39 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Cre16.g692050 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Dcu_g08692 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g15873 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
GSVIVT01035729001 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08400.1 SYP32, ATSYP32,... SYP3-group Qa-type SNARE component 0.11 OrthoFinder output from all 47 species
Mp1g08030.1 SYP32, ATSYP32 SYP3-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Msp_g02410 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Nbi_g03561 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pir_g02222 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pir_g14426 ATSED5, SED5,... Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Smo131549 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000145 exocyst IEP HCCA
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 239 287
IPR021538 Syntaxin-5_N 7 27
IPR000727 T_SNARE_dom 289 340
No external refs found!