Zm00001e025900_P002 (LUG, RON2, Zm00001e025900)

Aliases : LUG, RON2, Zm00001e025900

Description : transcriptional co-repressor (LUG)

Gene families : OG0000790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000790_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e025900_P002

Target	Alias	Description	ECC score	Gene Family Method
Als_g54967	LUG, RON2	component *(LUG/LUH) of transcriptional co-repressor...	0.03	OrthoFinder output from all 47 species
Aop_g14550	LUG, RON2	component *(LUG/LUH) of transcriptional co-repressor...	0.03	OrthoFinder output from all 47 species
Aop_g42335	LUG, RON2	component *(LUG/LUH) of transcriptional co-repressor...	0.03	OrthoFinder output from all 47 species
Cba_g06869	LUG, RON2	component *(LUG/LUH) of transcriptional co-repressor...	0.01	OrthoFinder output from all 47 species
Cba_g35403	LUG, RON2	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g09952	LUG, RON2	component *(LUG/LUH) of transcriptional co-repressor...	0.02	OrthoFinder output from all 47 species
LOC_Os02g56880.1	LUH, LOC_Os02g56880	transcriptional co-repressor (LUG)	0.09	OrthoFinder output from all 47 species
Len_g18018	LUG, RON2	component *(LUG/LUH) of transcriptional co-repressor...	0.02	OrthoFinder output from all 47 species
Mp1g15060.1	LUG, RON2	transcriptional co-repressor (LUG)	0.03	OrthoFinder output from all 47 species
Sam_g29261	No alias	component *(LUG/LUH) of transcriptional co-repressor...	0.03	OrthoFinder output from all 47 species
Solyc05g026480.2.1	LUG, RON2, Solyc05g026480	transcriptional co-repressor (LUG)	0.04	OrthoFinder output from all 47 species
Spa_g18148	LUG, RON2	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	651	688
IPR001680	WD40_repeat	612	644
IPR001680	WD40_repeat	575	602
IPR001680	WD40_repeat	818	849
IPR006692	Coatomer_WD-assoc_reg	696	786
IPR006594	LisH	10	36

External Links

No external refs found!