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  5. Zm00001e025713_P002

Zm00001e025713_P002 (PFU2, UBC23, Zm00001e025713)


Aliases : PFU2, UBC23, Zm00001e025713

Description : Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana (sp|q9zvx1|ubc23_arath : 852.0)


Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025713_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271430 PFU2, UBC23,... Probable ubiquitin-conjugating enzyme E2 23... 0.04 OrthoFinder output from all 47 species
AT2G16920 PFU2, UBC23 ubiquitin-conjugating enzyme 23 0.03 OrthoFinder output from all 47 species
Aob_g06748 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Ceric.34G022600.1 PFU2, UBC23,... E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Cre12.g510300 PFU2, UBC23 Probable ubiquitin-conjugating enzyme E2 25... 0.02 OrthoFinder output from all 47 species
Dcu_g13320 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01014343001 UBC25, PFU1 Probable ubiquitin-conjugating enzyme E2 25... 0.04 OrthoFinder output from all 47 species
GSVIVT01020551001 UBC25, PFU1 Probable ubiquitin-conjugating enzyme E2 25... 0.03 OrthoFinder output from all 47 species
GSVIVT01024005001 PFU2, UBC23 Probable ubiquitin-conjugating enzyme E2 23... 0.05 OrthoFinder output from all 47 species
LOC_Os01g03520.1 PFU2, UBC23,... Probable ubiquitin-conjugating enzyme E2 23... 0.04 OrthoFinder output from all 47 species
Mp7g09720.1 PFU2, UBC23 Probable ubiquitin-conjugating enzyme E2 23... 0.02 OrthoFinder output from all 47 species
Spa_g26572 UBC24, PHO2, ATUBC24 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 850 994
No external refs found!