Aliases : Zm00001e025643
Description : RUB ligase E3 protein (RBX1). UBQ-E2-recruiting component RBX1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes
Gene families : OG0002121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e025643_P003 | |
Cluster | HCCA: Cluster_21 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g25420 | APC11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g03284 | HRT1, ATRBX1, RBX1, ROC1 | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g543450 | No alias | Protein degradation.peptide tagging.Related-to-Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Cre13.g590900 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR024766 | Znf_RING_H2 | 55 | 113 |
No external refs found! |