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  5. Zm00001e025643_P003

Zm00001e025643_P003 (Zm00001e025643)


Aliases : Zm00001e025643

Description : RUB ligase E3 protein (RBX1). UBQ-E2-recruiting component RBX1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes


Gene families : OG0002121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025643_P003
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Als_g25420 APC11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03284 HRT1, ATRBX1, RBX1, ROC1 core component *(RBX1) of CULLIN-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cre12.g543450 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.01 OrthoFinder output from all 47 species
Cre13.g590900 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 55 113
No external refs found!