Zm00001e025632_P001 (Zm00001e025632)


Aliases : Zm00001e025632

Description : no hits & (original description: none)


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025632_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00136560 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
AT2G35540 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
AT3G04980 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g058078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27467.t1 Aspi01Gene27467 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010670 No alias not classified & original description: CDS=1-2310 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023718 No alias not classified & original description: CDS=66-2393 0.04 OrthoFinder output from all 47 species
Cba_g11872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.08 OrthoFinder output from all 47 species
Ceric.1Z097000.1 Ceric.1Z097000 not classified & original description: pacid=50640979... 0.05 OrthoFinder output from all 47 species
Dac_g07351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24126 No alias chaperone component *(SDJ) of SUVH-SDJ methylation... 0.04 OrthoFinder output from all 47 species
Ehy_g03863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01021980001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028708001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.1 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os04g31940.1 LOC_Os04g31940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g02170.1 LOC_Os06g02170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34440.1 LOC_Os06g34440 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Len_g13912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04267 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_96489g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g07614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06588 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g08915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03986 No alias chaperone component *(SDJ) of SUVH-SDJ methylation... 0.03 OrthoFinder output from all 47 species
Ppi_g05298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098250.4.1 Solyc01g098250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc07g047690.1.1 Solyc07g047690 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc08g029220.3.1 Solyc08g029220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g18706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26885 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
MF GO:0030623 U5 snRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024593 DUF3444 485 693
IPR024593 DUF3444 794 997
IPR001623 DnaJ_domain 68 129
No external refs found!