1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e025595_P002

Zm00001e025595_P002 (Zm00001e025595)


Aliases : Zm00001e025595

Description : CCT2 subunit beta of CCT chaperonin folding complex


Gene families : OG0005353 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005353_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025595_P002
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00026500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 OrthoFinder output from all 47 species
AT5G20890 No alias TCP-1/cpn60 chaperonin family protein 0.16 OrthoFinder output from all 47 species
Adi_g092819 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Aev_g24601 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Als_g14632 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Aob_g06619 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Aop_g02199 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0251.g060285 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.06 OrthoFinder output from all 47 species
Cba_g15823 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Ceric.02G085300.1 Ceric.02G085300 subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.30 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Cre09.g416750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 OrthoFinder output from all 47 species
Dac_g00849 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g14728 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.09 OrthoFinder output from all 47 species
Ehy_g02581 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01008708001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 OrthoFinder output from all 47 species
LOC_Os03g42220.1 LOC_Os03g42220 CCT2 subunit beta of CCT chaperonin folding complex 0.16 OrthoFinder output from all 47 species
LOC_Os05g48290.3 LOC_Os05g48290 CCT2 subunit beta of CCT chaperonin folding complex 0.12 OrthoFinder output from all 47 species
Len_g15421 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
MA_10434959g0010 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.08 OrthoFinder output from all 47 species
Mp5g16030.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.1 OrthoFinder output from all 47 species
Nbi_g03110 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Ore_g15486 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Pir_g03082 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Pp3c6_15940V3.1 Pp3c6_15940 TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Sam_g12467 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Smo171093 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Solyc11g069000.2.1 Solyc11g069000 CCT2 subunit beta of CCT chaperonin folding complex 0.13 OrthoFinder output from all 47 species
Spa_g11138 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species
Tin_g02689 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 28 515
No external refs found!