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  5. Zm00001e025263_P002

Zm00001e025263_P002 (ATSAP18, SAP18, Zm00001e025263)


Aliases : ATSAP18, SAP18, Zm00001e025263

Description : associated component SAP18 of histone deacetylase machineries


Gene families : OG0004148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025263_P002

Target Alias Description ECC score Gene Family Method Actions
AT2G45640 ATSAP18, SAP18 SIN3 associated polypeptide P18 0.04 OrthoFinder output from all 47 species
Pir_g56837 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ppi_g58058 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010516 SAP18 33 143
No external refs found!