Zm00001e024916_P001 (Zm00001e024916)


Aliases : Zm00001e024916

Description : CCT3 subunit gamma of CCT chaperonin folding complex


Gene families : OG0005075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024916_P001
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00176500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
AT5G26360 No alias TCP-1/cpn60 chaperonin family protein 0.07 OrthoFinder output from all 47 species
Adi_g087113 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Aev_g01274 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Ala_g14047 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Als_g08312 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Aop_g13024 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Aspi01Gene40040.t1 Aspi01Gene40040 subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Azfi_s0112.g045781 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Ceric.25G052600.1 Ceric.25G052600 subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.79 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 OrthoFinder output from all 47 species
Dac_g00874 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Dcu_g06317 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Dde_g01563 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Ehy_g01411 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01000266001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
GSVIVT01007770001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
Gb_37345 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
LOC_Os02g14929.1 LOC_Os02g14929 CCT3 subunit gamma of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
LOC_Os06g34690.1 LOC_Os06g34690 CCT3 subunit gamma of CCT chaperonin folding complex 0.11 OrthoFinder output from all 47 species
Len_g00631 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Lfl_g05564 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
MA_37504g0010 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Mp7g14360.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Nbi_g01088 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Pp3c12_7550V3.1 Pp3c12_7550 TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0213.g025987 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Sam_g15411 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Solyc05g056310.3.1 Solyc05g056310 CCT3 subunit gamma of CCT chaperonin folding complex 0.09 OrthoFinder output from all 47 species
Spa_g00971 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Tin_g01973 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 135 628
No external refs found!