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  5. Zm00001e024182_P002

Zm00001e024182_P002 (NF-YC11, Zm00001e024182)


Aliases : NF-YC11, Zm00001e024182

Description : component alpha of TATA box-binding protein NC2 regulator complex


Gene families : OG0002663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024182_P002
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00036880 NF-YC11,... RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
GSVIVT01037394001 NF-YC11 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Len_g07274 No alias component alpha of TATA box-binding protein NC2... 0.02 OrthoFinder output from all 47 species
Solyc01g096710.4.1 NF-YC11, Solyc01g096710 component alpha of TATA box-binding protein NC2 regulator complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 8 71
No external refs found!