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  5. Zm00001e024163_P002

Zm00001e024163_P002 (ATCAT6, CAT6, Zm00001e024163)


Aliases : ATCAT6, CAT6, Zm00001e024163

Description : cationic amino acid transporter (CAT)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024163_P002
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Adi_g110142 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53118.t1 ATCAT6, CAT6,... cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G046600.1 CAT7, Ceric.08G046600 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dac_g21454 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os11g05690.2 ATCAT6, CAT6,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Nbi_g22508 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g08012 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Solyc02g070280.3.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Zm00001e005030_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Zm00001e016491_P001 CAT5, Zm00001e016491 cationic amino acid transporter (CAT) 0.05 OrthoFinder output from all 47 species
Zm00001e018123_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR029485 CAT_C 524 574
IPR002293 AA/rel_permease1 67 493
No external refs found!