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  5. Zm00001e024080_P001

Zm00001e024080_P001 (Zm00001e024080)


Aliases : Zm00001e024080

Description : no hits & (original description: none)


Gene families : OG0005647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005647_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024080_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00121210 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At5g26960 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ceric.36G007500.1 Ceric.36G007500 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04330.1 LOC_Os11g04330 F-box/kelch-repeat protein At5g26960 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g04130.1 LOC_Os12g04130 F-box/kelch-repeat protein At5g26960 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g01027 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018615 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Solyc11g072080.1.1 Solyc11g072080 F-box/kelch-repeat protein At5g26960 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 187 227
IPR001810 F-box_dom 52 90
No external refs found!