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  5. Zm00001e023820_P001

Zm00001e023820_P001 (MSS3, Zm00001e023820)


Aliases : MSS3, Zm00001e023820

Description : no hits & (original description: none)


Gene families : OG0011039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023820_P001
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g52540.1 CML38, LOC_Os02g52540 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os07g42730.1 LOC_Os07g42730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030807_P001 Zm00001e030807 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 20 42
IPR002048 EF_hand_dom 61 79
No external refs found!