Zm00001e023748_P001 (RAP2.12, Zm00001e023748)


Aliases : RAP2.12, Zm00001e023748

Description : transcription factor (ERF)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023748_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00135920 HRE2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00195730 DREB1B, ATCBF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
AMTR_s00069p00141520 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00039760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.06 OrthoFinder output from all 47 species
Adi_g016418 RAP2.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34763 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Als_g36635 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Aob_g30583 LEP not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g60181 No alias subgroup ERF-X transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24402.t1 DEAR2, Aspi01Gene24402 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39110.t1 TINY2, Aspi01Gene39110 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72130.t1 TINY2, Aspi01Gene72130 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000091 ATERF-9, ERF9, ATERF9 not classified & original description: CDS=1-585 0.03 OrthoFinder output from all 47 species
Cba_g13419 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00708 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g01289 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01738 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16227 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dcu_g47796 ORA47 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03884 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25479 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26298 ATERF3, ERF3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12583 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_12588 ERF110 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_26662 ATERF3, ERF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_29263 DREB26 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g54160.2 RAP2.2, LOC_Os02g54160 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g27930.1 DREB2A, DREB2,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_130669g0010 No alias transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
MA_937270g0010 ERF2, ATERF2, ATERF-2 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
Msp_g04571 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25476 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06182 CRF3 subgroup ERF-VI transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g13186 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01199 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g21797 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15298 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g09795 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g04537 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Spa_g04539 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Tin_g00934 HRE1 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11988 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 115 164
No external refs found!