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  5. Zm00001e023720_P001

Zm00001e023720_P001 (XBAT32, Zm00001e023720)


Aliases : XBAT32, Zm00001e023720

Description : RING-HC-class E3 ligase


Gene families : OG0001806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023720_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G07270 XBAT33 XB3 ortholog 3 in Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g02940 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03981 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32042 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g026060.3.1 XBAT33, Solyc03g026060 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 88 208
IPR020683 DUF3447 20 81
IPR020683 DUF3447 223 277
No external refs found!