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  5. Zm00001e023458_P003

Zm00001e023458_P003 (ATHB1, ATHB-1, HAT5,...)


Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1, Zm00001e023458

Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023458_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00215130 ATHB5, ATHB-5,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT2G36610 ATHB22, HB22 homeobox protein 22 0.03 OrthoFinder output from all 47 species
Aev_g04744 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56748.t1 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ceric.09G061500.1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ceric.18G080300.1 ATHB21, HB21,... HD-ZIP I/II-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dac_g34453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019012001 ATHB40, HB40, HB-5 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01020078001 ATHB1, ATHB-1,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Gb_04698 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Gb_20878 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Len_g04607 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_12866g0010 ATHB21, HB21, HB-2 transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
MA_60543g0010 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Msp_g43112 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g34758 HB-7, ATHB-7, ATHB7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g07961 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Ppi_g31173 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ppi_g54343 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo18217 ATHB16, HB16, ATHB-16 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Solyc02g087840.3.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 129 170
IPR001356 Homeobox_dom 74 127
No external refs found!