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  5. Zm00001e023455_P001

Zm00001e023455_P001 (Zm00001e023455)


Aliases : Zm00001e023455

Description : CCT4 subunit delta of CCT chaperonin folding complex


Gene families : OG0005270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023455_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00145050 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
AT3G18190 No alias TCP-1/cpn60 chaperonin family protein 0.07 OrthoFinder output from all 47 species
Aev_g03918 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.01 OrthoFinder output from all 47 species
Aop_g04361 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Dcu_g03883 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Gb_12950 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g22780.1 LOC_Os02g22780 CCT4 subunit delta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Len_g04768 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
MA_18588g0010 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Pir_g04542 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Ppi_g03783 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Sam_g12483 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Solyc03g118910.1.1 Solyc03g118910 CCT4 subunit delta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 37 533
No external refs found!