Zm00001e023137_P001 (chr31, Zm00001e023137)

Aliases : chr31, Zm00001e023137

Description : RDR2-polymerase regulator protein CLSY3/4

Gene families : OG0001261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001261_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e023137_P001
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
AT2G21450	CHR34	chromatin remodeling 34	0.03	OrthoFinder output from all 47 species
Ceric.1Z068800.1	CLSY, CHR38,...	regulatory protein *(CLSY3/4) of transacting siRNA...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000733.15	CHR34	Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01013277001	chr31	RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein	0.03	OrthoFinder output from all 47 species
LOC_Os03g06920.1	DMS1, DRD1,...	chromatin remodeling factor (DRD1). component DRD1 of...	0.06	OrthoFinder output from all 47 species
LOC_Os07g25390.1	DMS1, DRD1,...	chromatin remodeling factor (DRD1). component DRD1 of...	0.03	OrthoFinder output from all 47 species
Mp4g09280.1	DMS1, DRD1, CHR35	Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc01g060460.2.1	chr31, Solyc01g060460	RDR2-polymerase regulator protein CLSY3/4	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	1159	1266
IPR000330	SNF2_N	793	1088

External Links

No external refs found!