1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e022375_P001

Zm00001e022375_P001 (Zm00001e022375)


Aliases : Zm00001e022375

Description : Cell division cycle protein 48 homolog OS=Glycine max (sp|p54774|cdc48_soybn : 304.0)


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022375_P001
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cba_g10573 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09970 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g31870.1 LOC_Os08g31870 platform ATPase (CDC48) 0.02 OrthoFinder output from all 47 species
MA_101094g0020 CDC48A, CDC48, ATCDC48 Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 47 species
Ppi_g55150 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025331_P002 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 119 158
IPR003959 ATPase_AAA_core 3 96
No external refs found!