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  5. Zm00001e022371_P002

Zm00001e022371_P002 (Zm00001e022371)


Aliases : Zm00001e022371

Description : pre-60S ribosomal subunit assembly factor (NOP15)


Gene families : OG0005172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022371_P002

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0078.g038170 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000137.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre08.g368500 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os08g31810.3 LOC_Os08g31810 pre-60S ribosomal subunit assembly factor (NOP15) 0.03 OrthoFinder output from all 47 species
Len_g22344 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.03 OrthoFinder output from all 47 species
MA_128667g0010 No alias pre-60S ribosomal subunit assembly factor (NOP15) 0.03 OrthoFinder output from all 47 species
Mp6g13260.1 No alias pre-60S ribosomal subunit assembly factor (NOP15) 0.03 OrthoFinder output from all 47 species
Msp_g00441 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Ore_g06706 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.03 OrthoFinder output from all 47 species
Pnu_g08497 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.03 OrthoFinder output from all 47 species
Sam_g13355 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Sam_g23704 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 56 125
No external refs found!