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  5. Zm00001e021897_P001

Zm00001e021897_P001 (Zm00001e021897)


Aliases : Zm00001e021897

Description : PHD finger protein EHD3 OS=Oryza sativa subsp. japonica (sp|q6zjm9|ehd3_orysj : 401.0)


Gene families : OG0002848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021897_P001
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Cba_g72066 ATMBD9, MBD9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008795001 No alias PHD finger protein EHD3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020698 No alias not classified & original description: CDS=132-2882 0.02 OrthoFinder output from all 47 species
Solyc04g058190.3.1 Solyc04g058190 PHD finger protein EHD3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 307 353
IPR019787 Znf_PHD-finger 472 519
No external refs found!