Zm00001e021086_P004 (Zm00001e021086)


Aliases : Zm00001e021086

Description : transcription factor (NDX)


Gene families : OG0003424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003424_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021086_P004

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00031700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Adi_g086373 No alias NDX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02709 No alias NDX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22370 No alias NDX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07774 No alias NDX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08164 No alias NDX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14457 No alias NDX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g09630.1 LOC_Os05g09630 transcription factor (NDX) 0.05 OrthoFinder output from all 47 species
MA_57200g0010 No alias transcription factor (NDX) 0.02 OrthoFinder output from all 47 species
Mp1g16560.1 No alias transcription factor (NDX) 0.03 OrthoFinder output from all 47 species
Msp_g20779 No alias NDX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43437 No alias NDX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45687 No alias NDX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30227 No alias NDX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc09g074330.3.1 Solyc09g074330 transcription factor (NDX) 0.03 OrthoFinder output from all 47 species
Spa_g07603 No alias NDX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!