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Aliases : PDF1, Zm00001e019923
Description : Protodermal factor 1 OS=Arabidopsis thaliana (sp|q9s728|pdf1_arath : 97.1)
Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e019923_P004 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00030870 | evm_27.TU.AmTr_v1... | No description available | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00068p00158450 | PDF1,... | Protodermal factor 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00858p00001360 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT2G42840 | PDF1 | protodermal factor 1 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g007335 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g007336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g050187 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g116822 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g116823 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g00397 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04302 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09555 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g24247 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04142 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05496 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g18021 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene06254.t2 | Aspi01Gene06254 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene23243.t1 | Aspi01Gene23243 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene23865.t1 | Aspi01Gene23865 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28876.t1 | Aspi01Gene28876 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene41347.t1 | Aspi01Gene41347 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene69388.t1 | Aspi01Gene69388 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene71674.t1 | Aspi01Gene71674 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042790 | No alias | not classified & original description: CDS=188-1138 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06214 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g08901 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16161 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G093300.1 | Ceric.03G093300 | not classified & original description: pacid=50573210... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G029600.1 | Ceric.09G029600 | not classified & original description: pacid=50588127... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G030000.1 | Ceric.09G030000 | not classified & original description: pacid=50587904... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G022300.1 | Ceric.13G022300 | not classified & original description: pacid=50635736... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G044400.1 | Ceric.14G044400 | not classified & original description: pacid=50634347... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G043800.1 | Ceric.22G043800 | not classified & original description: pacid=50614893... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07202 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g07203 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g22672 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02335 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g35615 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g16848 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g28301 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46939 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08732 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g09365 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09543 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g10117 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13225 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g13226 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g13227 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g13693 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13694 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13695 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g13696 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g15103 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g15104 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g18161 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18994 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g29307 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_12682 | No alias | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Gb_40194 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g10490.1 | LOC_Os01g10490 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g52690.1 | PDF1, LOC_Os01g52690 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os02g13660.1 | LOC_Os02g13660 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g43670.1 | LOC_Os04g43670 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g35970.1 | LOC_Os06g35970 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.1 | OrthoFinder output from all 47 species | |
| Len_g54705 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_111671g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g10620.1 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g22090.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g11806 | PDF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11807 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g29044 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44797 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g38186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23508 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26532 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26533 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26786 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g39776 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g23849 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c3_2630V3.1 | Pp3c3_2630 | No annotation | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11102 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g57949 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010928 | No alias | not classified & original description: CDS=1-1425 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0034.g011225 | No alias | not classified & original description: CDS=1-924 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013066 | No alias | not classified & original description: CDS=357-1112 | 0.03 | OrthoFinder output from all 47 species | |
| Smo437656 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g51109 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g45104 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016528_P003 | Zm00001e016528 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030674_P001 | Zm00001e030674 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030749_P002 | Zm00001e030749 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| BP | GO:0017148 | negative regulation of translation | IEP | HCCA |
| MF | GO:0030597 | RNA glycosylase activity | IEP | HCCA |
| MF | GO:0030598 | rRNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034249 | negative regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |