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Aliases : Zm00001e019596
Description : Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana (sp|p0c7r4|pp110_arath : 595.0)
Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e019596_P001 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00179800 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g17616... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00002p00272000 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g03100,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00019p00220910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g03100,... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G68980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G69290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g059183 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075176 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09800 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g14976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04085 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09114 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_34245 | No alias | Pentatricopeptide repeat-containing protein At1g03100,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_34895 | No alias | Pentatricopeptide repeat-containing protein At1g69290... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g31310.1 | LOC_Os07g31310 | Pentatricopeptide repeat-containing protein At4g17616... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g28665.1 | LOC_Os10g28665 | Pentatricopeptide repeat-containing protein At1g03100,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_90791g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33799 | CRM3, HCF152 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g088750.3.1 | Solyc01g088750 | Pentatricopeptide repeat-containing protein At1g69290... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |