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  5. Zm00001e019193_P002

Zm00001e019193_P002 (SNX1, ATSNX1, Zm00001e019193)


Aliases : SNX1, ATSNX1, Zm00001e019193

Description : component SNX1 of Retromer protein recycling complex


Gene families : OG0003446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019193_P002

Target Alias Description ECC score Gene Family Method Actions
Aop_g12488 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.02 OrthoFinder output from all 47 species
Aspi01Gene20524.t1 SNX1, ATSNX1,... regulatory factor SNX1 of Retromer protein recycling... 0.02 OrthoFinder output from all 47 species
Cre06.g281050 SNX1, ATSNX1 Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Pir_g13412 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR015404 Vps5_C 166 390
IPR001683 PX_dom 20 134
No external refs found!