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  5. Zm00001e019054_P001

Zm00001e019054_P001 (Zm00001e019054)


Aliases : Zm00001e019054

Description : Ubinuclein-1 OS=Arabidopsis thaliana (sp|q8rx78|ubn1_arath : 320.0)


Gene families : OG0002157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019054_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g057320 No alias component *(UBN) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g08113 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g03526 No alias component *(UBN) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
Dcu_g19398 No alias component *(UBN) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
Dcu_g32525 No alias component *(UBN) of HIRA chaperone complex & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01008808001 No alias Ubinuclein-1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g66050.1 LOC_Os01g66050 Ubinuclein-1 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Mp2g14320.1 No alias Ubinuclein-1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Ore_g31487 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Ore_g44164 No alias component *(UBN) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
Ore_g44860 No alias component *(UBN) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
Pnu_g17049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13994 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Smo402260 No alias Ubinuclein-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo440877 No alias Ubinuclein-2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc11g005130.2.1 Solyc11g005130 Ubinuclein-1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014840 HRD 146 193
No external refs found!