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  5. Zm00001e018925_P002

Zm00001e018925_P002 (Zm00001e018925)


Aliases : Zm00001e018925

Description : B3 domain-containing protein Os01g0905400 OS=Oryza sativa subsp. japonica (sp|q5n6v0|y1054_orysj : 436.0)


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018925_P002

Target Alias Description ECC score Gene Family Method Actions
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.01 OrthoFinder output from all 47 species
Adi_g075571 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G084400.1 Ceric.02G084400 REM-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g14224 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15058 No alias REM-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g07766 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g67830.1 LOC_Os01g67830 B3 domain-containing protein Os01g0905400 OS=Oryza... 0.06 OrthoFinder output from all 47 species
MA_430451g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g44971 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g35599 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g01929 No alias REM-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g11582 No alias REM-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g11583 No alias REM-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Solyc04g079130.2.1 Solyc04g079130 transcription factor (REM) 0.01 OrthoFinder output from all 47 species
Solyc06g034140.3.1 Solyc06g034140 transcription factor (REM) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 94 181
IPR003340 B3_DNA-bd 619 684
No external refs found!