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  5. Zm00001e018582_P001

Zm00001e018582_P001 (MDF, DOT2, Zm00001e018582)


Aliases : MDF, DOT2, Zm00001e018582

Description : SART-1 family protein DOT2 OS=Arabidopsis thaliana (sp|q9lfe0|dot2_arath : 416.0)


Gene families : OG0004143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018582_P001
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00135160 MDF, DOT2,... SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT5G16780 MDF, DOT2 SART-1 family 0.15 OrthoFinder output from all 47 species
Adi_g055487 MDF, DOT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49913 MDF, DOT2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g03521 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G049800.1 MDF, DOT2,... not classified & original description: pacid=50634914... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000471.16 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre03.g156100 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g17126 MDF, DOT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07125 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035173001 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_00217 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_12198 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
LOC_Os02g30730.2 MDF, DOT2, LOC_Os02g30730 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Lfl_g10540 MDF, DOT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp8g09130.1 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Ore_g19696 MDF, DOT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo404232 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc11g008460.1.1 MDF, DOT2, Solyc11g008460 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
Solyc11g008470.2.1 MDF, DOT2, Solyc11g008470 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP HCCA
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 156 676
IPR005011 SNU66/SART1 692 738
No external refs found!