Aliases : MYB54, ATMYB54, Zm00001e018391
Description : transcription factor (MYB)
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e018391_P001 | |
Cluster | HCCA: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00225600 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00010p00264600 | AtMYB117, LOF1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00024p00137930 | MYB54, ATMYB54,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00186p00015620 | BW52, ATMYB52,... | RNA biosynthesis.transcriptional activation.MYB... | 0.06 | OrthoFinder output from all 47 species | |
AT1G17950 | BW52, ATMYB52, MYB52 | myb domain protein 52 | 0.03 | OrthoFinder output from all 47 species | |
AT1G26780 | AtMYB117, LOF1, MYB117 | myb domain protein 117 | 0.03 | OrthoFinder output from all 47 species | |
AT1G69560 | LOF2, MYB105, ATMYB105 | myb domain protein 105 | 0.05 | OrthoFinder output from all 47 species | |
AT1G73410 | MYB54, ATMYB54 | myb domain protein 54 | 0.06 | OrthoFinder output from all 47 species | |
AT4G33450 | ATMYB69, MYB69 | myb domain protein 69 | 0.04 | OrthoFinder output from all 47 species | |
AT5G67300 | MYBR1, MYB44,... | myb domain protein r1 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g020716 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g074060 | MYB70, AtMYB70 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g109382 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g38609 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g02622 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g09398 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g27236 | BW52, ATMYB52, MYB52 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g18058 | MYB3R-3, AtMYB3R3 | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g23891 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene07164.t1 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene27436.t1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene49877.t1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000218 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0103.g044681 | BW52, ATMYB52, MYB52 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.19G007400.1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.37G042200.1 | ATMYB119,... | MYB class-R2R3 transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Cre07.g345350 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g16265 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008484001 | MYB54, ATMYB54 | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010006001 | BW52, ATMYB52, MYB52 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
Gb_23308 | AtMYB98, MYB98 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
Gb_24073 | MYB77 | transcription factor (MYB) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g63680.1 | PGA37, ATMYB118,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g74590.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g51110.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os05g28320.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g10130.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
Len_g10129 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g06086 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
MA_120049g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_89683g0010 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
Mp1g17210.1 | ATMYB119, MYB119 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g09350.1 | AtMYB98, MYB98 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
Mp8g11870.1 | AtMYB117, LOF1, MYB117 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g06500 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g05843 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g29190 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g12037 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c17_19960V3.1 | Pp3c17_19960 | No annotation | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g08288 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.11 | OrthoFinder output from all 47 species | |
Ppi_g12324 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000153 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0129.g021926 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0226.g026344 | MYB70, AtMYB70 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Smo6091 | AtMYB117, LOF1, MYB117 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g098270.1.1 | LOF2, MYB105,... | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g112890.1.1 | AtMYB98, MYB98,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g076840.3.1 | ATMYB119,... | transcription factor (MYB) | 0.07 | OrthoFinder output from all 47 species | |
Spa_g08757 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g12777 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g16126 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005044_P002 | ATMYB119,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005507_P001 | BW52, ATMYB52,... | transcription factor (MYB) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0005506 | iron ion binding | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
No external refs found! |