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  5. Zm00001e017993_P001

Zm00001e017993_P001 (CYCA3;1, Zm00001e017993)


Aliases : CYCA3;1, Zm00001e017993

Description : cyclin (CYCA)


Gene families : OG0001097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017993_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272790 CYCA3;1,... Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 OrthoFinder output from all 47 species
AT1G44110 CYCA1;1 Cyclin A1;1 0.03 OrthoFinder output from all 47 species
AT1G80370 CYCA2;4 Cyclin A2;4 0.03 OrthoFinder output from all 47 species
Adi_g032026 CYCA1;1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g039314 CYCA2;1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03751 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.05 OrthoFinder output from all 47 species
Als_g14283 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Aop_g01772 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008079 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010440 CYCA1;1 not classified & original description: CDS=585-2150 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016140 CYCA1;1 not classified & original description: CDS=307-1776 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048725 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Dcu_g12296 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Dde_g14127 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
GSVIVT01008823001 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 OrthoFinder output from all 47 species
Gb_03779 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
LOC_Os01g13260.1 CYCA1;1, LOC_Os01g13260 cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
LOC_Os03g41100.1 CYCA3;1, LOC_Os03g41100 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39210.1 CYCA3;4, LOC_Os12g39210 cyclin (CYCA) 0.07 OrthoFinder output from all 47 species
Len_g08312 CYC3B, CYCA2;2, CYC2BAT regulatory protein *(CYCA) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g06697 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Nbi_g24493 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Ppi_g05200 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.05 OrthoFinder output from all 47 species
Ppi_g31211 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.05 OrthoFinder output from all 47 species
Sam_g28584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g120440.3.1 CYCA2;4, Solyc03g120440 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
Solyc06g065680.3.1 CYCA2;4, Solyc06g065680 cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
Solyc12g088530.2.1 CYCA3;1, Solyc12g088530 cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
Spa_g11267 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Spa_g39403 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Tin_g30126 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 220 335
IPR004367 Cyclin_C-dom 338 458
No external refs found!