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  5. Zm00001e017662_P001

Zm00001e017662_P001 (MEE32, EMB3004, Zm00001e017662)


Aliases : MEE32, EMB3004, Zm00001e017662

Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase


Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017662_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g014386 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Ala_g11559 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Ala_g28387 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Aob_g16805 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Cba_g39092 MEE32, EMB3004 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre08.g380201 MEE32, EMB3004 Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
Dac_g16529 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Dcu_g09890 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Dde_g10597 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Gb_24244 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.04 OrthoFinder output from all 47 species
LOC_Os01g27750.1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.06 OrthoFinder output from all 47 species
LOC_Os12g34874.2 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.05 OrthoFinder output from all 47 species
Len_g24227 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Lfl_g04744 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Msp_g24819 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Pir_g01339 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Solyc01g067750.3.1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.03 OrthoFinder output from all 47 species
Spa_g22046 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013708 Shikimate_DH-bd_N 347 427
IPR001381 DHquinase_I 116 333
IPR041121 SDH_C 586 615
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 465 525
No external refs found!